JASPAR is an open-access database of curated, non-redundant transcription factor binding profiles from six taxonomic groups. It stores manually curated binding preferences as position frequency matrices that can be converted into models for scanning DNA sequences and predicting transcription factor binding sites. From 2026 it also stores deep learning models and discovered position frequency matrices linked to its PFM collections.
The YRC Public Image Repository is a database of fluorescent microscopy images depicting the localization, co-localization and FRET of proteins in cells, particularly in the budding yeast Saccharomyces cerevisiae. The full dataset can be downloaded, and a form allows searching, viewing and downloading subsets. It reports 131,490 experiments, 1,348,013 images and 4,400 GO terms represented.
MINDS@UW is an open repository of the Universities of Wisconsin. It allows searching of research papers, theses, datasets, student projects and other scholarly materials, and browsing collections by UW campus. New submissions must meet WCAG 2.1 Level AA accessibility guidelines, and the submitter is responsible for meeting these standards.
Digital Porous Media Portal, formerly Digital Rocks Portal, is a data portal for storage, retrieval, sharing, organization and analysis of images of porous micro-structures. It hosts public datasets and lets users manage, preserve, visualize and analyze images and related measurements such as porosity, capillary pressure and permeability for modeling porous material properties.
The Atlas of Living Australia is a biodiversity data platform offering open access to Australian biodiversity data. It holds occurrence records and datasets and lets users search and download records by species, taxon, dataset, region, date or location. It provides tools including an R and Python package, a spatial portal and BioCollect for surveys and field data.
NEMAR is an open-access data, tools and compute resource for searching, visualizing, analyzing and downloading human EEG, MEG, iEEG and EMG datasets. Datasets are contributed by researchers or mirrored from OpenNeuro and are BIDS-formatted with data-quality and HED event annotations. A viewer supports annotating recordings with HED and SCORE terms exported as BIDS files.
The ESTHER database is a server for analysis of proteins or protein domains belonging to the alpha/beta-hydrolase superfamily, exemplified by the cholinesterases. Its interface provides browsable classes such as Author, Chemical, Disease, Family, Inhibitor, Mutation, Paper, Reactivator, Species, Structure and Substrate, alongside a news section citing published research.
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The YRC Public Image Repository is a database of fluorescent microscopy images depicting the localization, co-localization and FRET of proteins in cells, particularly in the budding yeast Saccharomyces cerevisiae. The full dataset can be downloaded, and a form allows searching, viewing and downloading subsets. It reports 131,490 experiments, 1,348,013 images and 4,400 GO terms represented.
MINDS@UW is an open repository of the Universities of Wisconsin. It allows searching of research papers, theses, datasets, student projects and other scholarly materials, and browsing collections by UW campus. New submissions must meet WCAG 2.1 Level AA accessibility guidelines, and the submitter is responsible for meeting these standards.
Digital Porous Media Portal, formerly Digital Rocks Portal, is a data portal for storage, retrieval, sharing, organization and analysis of images of porous micro-structures. It hosts public datasets and lets users manage, preserve, visualize and analyze images and related measurements such as porosity, capillary pressure and permeability for modeling porous material properties.
The Atlas of Living Australia is a biodiversity data platform offering open access to Australian biodiversity data. It holds occurrence records and datasets and lets users search and download records by species, taxon, dataset, region, date or location. It provides tools including an R and Python package, a spatial portal and BioCollect for surveys and field data.
NEMAR is an open-access data, tools and compute resource for searching, visualizing, analyzing and downloading human EEG, MEG, iEEG and EMG datasets. Datasets are contributed by researchers or mirrored from OpenNeuro and are BIDS-formatted with data-quality and HED event annotations. A viewer supports annotating recordings with HED and SCORE terms exported as BIDS files.
The ESTHER database is a server for analysis of proteins or protein domains belonging to the alpha/beta-hydrolase superfamily, exemplified by the cholinesterases. Its interface provides browsable classes such as Author, Chemical, Disease, Family, Inhibitor, Mutation, Paper, Reactivator, Species, Structure and Substrate, alongside a news section citing published research.
