The Global Proteome Machine Organisation supports open source bioinformatics tools for large scale proteomics and systems biology. The site hosts the GPM Blog, which posts items on protein sequence topics such as KDEL C-terminal sequence tags, homeodomain phosphorylation and scrapbooks of tissue-specific protein Q-stickers. A notice states that US IP addresses are no longer allowed to make queries of GPMDB.
MG-RAST is an open source, open submission web application server that suggests automatic phylogenetic and functional analysis of metagenomes. It is also one of the biggest repositories for metagenomic data. Users can turn raw sequence into analyzed data and deposit metagenomic data for public reference.
CancerData is a website promoting free and open-source resource sharing for cancer care. It offers a collection of resources including a brain radiotherapy atlas and contouring instructions, and highlights a deep learning model for contouring guidelines for organs at risk in neuro-oncology.
Search construction engineering and architecture data collections and supporting datasets from DEU.
The WHOI Seafloor Samples Laboratory is a repository that curates marine geological samples, including rocks, lake and marine sediment, corals, shells, peat and wood. It distributes geological subsamples for research and education and provides technical and analytical expertise, instrumentation and field equipment. All repository samples must be requested via the request form.
HydroShare is CUAHSI's online collaboration environment for sharing hydrologic data, models, and code. Users upload files through a web interface, describe them with metadata, choose who can access them, and can obtain Digital Object Identifiers for citation. The platform also offers a REST web service API and Python client, and web apps for visualizing, analyzing, and running models.
A curated catalogue of human genomic structural variation. It offers keyword, landmark or region search across genome builds and allows users to find variants by study, sample, method, variant, platform or chromosome, with summary statistics and downloadable data.
Community notes
Be the first to share how this project worked for you.
Sign in with a verified account to leave a review or join the discussion.
Sign in to reviewKeep exploring
MG-RAST is an open source, open submission web application server that suggests automatic phylogenetic and functional analysis of metagenomes. It is also one of the biggest repositories for metagenomic data. Users can turn raw sequence into analyzed data and deposit metagenomic data for public reference.
CancerData is a website promoting free and open-source resource sharing for cancer care. It offers a collection of resources including a brain radiotherapy atlas and contouring instructions, and highlights a deep learning model for contouring guidelines for organs at risk in neuro-oncology.
Search construction engineering and architecture data collections and supporting datasets from DEU.
The WHOI Seafloor Samples Laboratory is a repository that curates marine geological samples, including rocks, lake and marine sediment, corals, shells, peat and wood. It distributes geological subsamples for research and education and provides technical and analytical expertise, instrumentation and field equipment. All repository samples must be requested via the request form.
HydroShare is CUAHSI's online collaboration environment for sharing hydrologic data, models, and code. Users upload files through a web interface, describe them with metadata, choose who can access them, and can obtain Digital Object Identifiers for citation. The platform also offers a REST web service API and Python client, and web apps for visualizing, analyzing, and running models.
A curated catalogue of human genomic structural variation. It offers keyword, landmark or region search across genome builds and allows users to find variants by study, sample, method, variant, platform or chromosome, with summary statistics and downloadable data.
