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Published directory entries matching your search.
BindingDB is a public molecular recognition database supporting research, education and practice in drug discovery, pharmacology and related fields. It contains 3.2M data entries for 1.4M compounds and 11.5K targets, of which 1.6M data for 778K compounds and 4.8K targets were curated by BindingDB curators. Downloads and search results include publication and curation dates for each measurement.
Bioconductor is an open source project that develops and shares software for precise and repeatable analysis of biological data. It uses the R statistical programming language and offers software, annotation and experiment packages, with two releases each year. Docker images are provided for every release, and support is offered for use in AnVIL.
The database of Biofilm-active antimicrobial peptides is described as the first database dedicated to antimicrobial peptides tested specifically against microbial biofilms. It aims to provide open-access resources on AMPs against biofilms for microbiologists, bioinformatics researchers and medical scientists working in the field.
BioGPS is a free, extensible and customizable gene annotation portal described as a complete resource for learning about gene and protein function. Users search for a gene, view its annotation report, browse gene report layouts, and build their own layouts. The site lists statistics for custom layouts and offers plugins and datasets, along with downloads, an API and an iPhone app.
BioGRID ORCS is an open repository of CRISPR screens compiled through curation efforts. Its search index covers publications, genes, screens from major model organism species, cell lines and cell types. Screen data are provided through the search index and available for download in standardized formats, and the data can also be accessed via a REST web service.
BMRB is a data bank that collects, annotates, archives, and disseminates spectral and quantitative data from NMR spectroscopic investigations of biological macromolecules and metabolites. The project states that it makes bio-NMR data FAIR: findable, accessible, interoperable, and reusable. It covers proteins, nucleic acids, carbohydrates, and organics.
BioVeL is an evidence-based biodiversity science reference resource. It provides clear coverage of key topics including population ecology, types of biodiversity, 36 global conservation hotspots, threats to wildlife and associated research workflows. The reference includes information on over 8.7 million described species and more than 1 million threatened species.
Boomerang is an email extension for Gmail and Google Workspace that adds meeting scheduling and email productivity tools. It includes Send Later scheduling, reminders, and meeting scheduling features such as Meeting Poll, Bookable Schedule and Share Free/Busy. A free Basic plan is available, with paid Personal, Pro and Premium plans billed annually.
BRENDA is a comprehensive enzyme information system offering text-based and structure-based queries, an EC explorer, visualization, and prediction tools. It includes enzyme summary pages, ligand and tissue ontology searches, taxonomy and genome browsing, and pathway maps. The online version is free under the CC BY 4.0 license.
Broad GDAC Firehose is a portal listing cancer disease cohorts, such as adrenocortical carcinoma and bladder urothelial carcinoma, with case counts and links to browse analyses and data. Downloading primary data and analysis results constitutes agreement to adhere to TCGA guidelines on responsible data use.
The CONP Portal is a web interface for finding, sharing and downloading open neuroscience datasets and analysis tools from the Canadian Open Neuroscience Platform. It also lists tutorials explaining how the portal works.
The Canadian Urban Data Repository hosts the Canadian Urban Data Catalogue (CUDC), a platform that catalogs urban datasets with metadata organized across six maturity levels covering basic information, access parameters, content details, privacy information, Indigenous data considerations, and data quality metrics.
The Cancer Genome Atlas (TCGA) is an NCI and National Human Genome Research Institute program that molecularly characterized over 20,000 primary cancer and matched normal samples spanning 33 cancer types. TCGA data are publicly available and accessible through the Genomic Data Commons Data Portal, which provides web-based analysis and visualization tools.
CancerData is a website promoting free and open-source resource sharing for cancer care. It offers a collection of resources including a brain radiotherapy atlas and contouring instructions, and highlights a deep learning model for contouring guidelines for organs at risk in neuro-oncology.
Cantonese.ca is a website offering information for learning colloquial Cantonese (Yue Chinese) as spoken by youth in Hong Kong and in overseas communities. It covers tones, pronunciation, common phrases, basic vocabulary, grammar, and thematic vocabulary.
CAPlayground is an open source editor for creating animated wallpapers for iOS and iPadOS on desktop computers. It combines layer types, including basic, gradient, image, video, emitter, transform, replicator and liquid glass layers, to build wallpaper compositions.
The Carbohydrate-Active enZYmes Database is a specialist database, online since 1998, describing families of structurally-related catalytic and carbohydrate-binding modules of enzymes that degrade, modify, or create glycosidic bonds. Data can be browsed by sequence-based families or by genome content, with new genomes added after GenBank releases. It also offers automatic annotation and human curation services for data.
CATH is a free online database providing information on evolutionary relationships of protein domains, developed by the Orengo group at University College London. Structures from the Protein Data Bank are split into domains and classified by class, architecture, topology and homologous superfamily. Gene3D adds sequence data from UniProtKB and Ensembl, assigning domains to superfamilies.
The Cell Image Library is an accessible resource database of images, videos, and animations of cells, capturing a wide diversity of organisms, cell types, and cellular processes. It offers advanced search, an open source API, and CDeep3M, and hosts over 12,000 unique datasets and 30 TB of data. It also accepts image submissions.
Cellosaurus is a knowledge resource and database that aims to describe cell lines used in biomedical research. Its scope includes immortalized, naturally immortal tissue limited-life distributed cell lines, and vertebrate cell lines with emphasis on human, mouse and rat, plus invertebrate and plant cell lines. Records include names, synonyms, accession numbers, species of origin and comments. It also offers search tools, downloads and documentation.
Dataset repository covering basic in biology and medicine, with searchable aggregated data.
chemguide is a site aimed at helping advanced level chemistry students understand chemistry. Its menu covers atomic structure and bonding, inorganic chemistry, physical chemistry, instrumental analysis, basic organic chemistry, organic reaction mechanisms, chemistry calculations and textbook suggestions. A section for 14 to 16 year old students on courses such as GCSE is still being written.
The Chickpea Transcriptome Database (CTDB) is a freely available resource providing information and tools about the chickpea transcriptome, including sequence, functional annotation, conserved domains, transcription factor families, molecular markers and gene expression. It offers a portal to search, browse and query the data to support functional and applied genomics research in chickpea and other legumes.
A game that teaches piano chords and chord progressions using a MIDI keyboard. The player selects a genre, scale, key and level, then plays notes and chords as they fall down the play area before reaching the bottom. Levels 1-3 are free and cover scale notes and basic chords; levels 4-8 are unlocked with a one-time purchase.
