Directory
Published directory entries matching your search.
AllYouCanRead.com is a guide to magazines, newspapers and news sites, with listings for about 25,000 publications from over 200 countries. Listings are categorized by country and subcategorized by topic, such as art, business or travel. Basic and advanced search engines can search publications by name, keyword, category or location. Integrated subscription offers are also listed.
AmoebaDB is part of the VEuPathDB platform, which provides FAIR access to genomic data for eukaryotic microbes including protists and fungi, as well as hosts and arthropod vectors of pathogenic species. The platform works to secure the long-term financial sustainability of its globally used biomedical data resources.
An unofficial Discord.js beginner's guide for version 13 of the library, maintained by York and Discordaholic with contributors. It aims to explain use of the library and its extension with the reader's own code. The text states that a basic understanding of JavaScript is expected before writing bots.
The Androgen Receptor Mutations Database is a resource hosted by The Lady Davis Institute for Medical Research that catalogs mutations of the Androgen Receptor Gene. It accepts new mutation submissions from reputable research or clinical laboratories, and users are asked to reference its 2012 update paper when citing the database.
The Animal Genome Size Database is a catalogue of animal genome size data. It provides haploid DNA contents in picograms for 6534 species, with 8416 records drawn from 815 published sources. Release 2.0 adds enhanced browsing and search functions, data export capabilities, and summaries of available data. The database is for personal and academic use.
Animated AI is a project of animations and instructional videos about neural networks. Its topics cover convolution basics, padding, stride, grouped and depthwise-separable convolution, and pixel shuffle. It is licensed under the MIT License.
Animated Knots by Grog is a site for learning how to tie knots, with animated step-by-step demonstrations. It covers categories including boating, fishing and climbing knots, neckties, and surgical knots, and offers a Knot of the Day and basic knot guidance.
Antimicrobial Combination Networks is a database that catalogs experimentally tested antimicrobial combinations. It includes 1556 combinations among antimicrobial peptides and other antimicrobial agents tested against organisms including Pseudomonas aeruginosa, Staphylococcus aureus, and Listeria monocytogenes, and allows users to search for combinations by organism, antimicrobial agent, or between two antimicrobial components.
The Antimicrobial Peptide Database (APD6) is a resource focused on antimicrobial peptides. It offers a searchable interface with filtering options by attributes such as AMP ID, name, chemical modification, binding target, source organism, sequence, and peptide length. The database also includes supplementary materials including nomenclature guidance, classification systems, a glossary, 3D structure information, statistical data, related database links, and news updates.
Apache Zeppelin is a web-based notebook for data-driven, interactive data analytics and collaborative documents with SQL, Scala, Python, R and more. It uses interpreters to plug in language and data-processing backends, including built-in Apache Spark integration, and includes basic charts, pivot charts, dynamic forms and paragraph publishing to embed results in websites.
APID (Agile Protein Interactomes DataServer) is a database that aggregates comprehensive protein interactome data for more than 1000 organisms. It integrates experimentally validated protein-protein physical interaction data, and offers search functionality for individual proteins, lists of proteins, and associated publications. The platform includes a network viewer for visualizing interaction data.
ArrayExpress is a functional genomics data collection that stores data from high-throughput functional genomics experiments and provides data for reuse to the research community. A study typically contains metadata such as sample annotations, protocols, processed data and raw data. Raw sequence reads are brokered to the European Nucleotide Archive, with links provided.
arrayMap is a Progenetix collection subset containing samples for which the probe-specific array was used for data generation. Individual array probe plots for these samples are accessible through the sample details pages.
A Basic Guide to ASL is an American Sign Language dictionary for Internet users, combining text, graphics and animations to provide sign definitions for common terms. It includes the alphabet and numbers 1-10, with animated and text definitions.
The Australian Drosophila Ecology and Evolution Resource is a life science collection from the Hoffmann Lab at the University of Melbourne and other contributors. It provides clinal, genomic and species distribution data covering the genera Drosophila, Scaptodrosophila and Zaprionus, with datasets explorable by traits.
BacMap is an interactive visual database of annotated bacterial genomes, offering zoomable and searchable chromosome maps with hyperlinked gene labels. It provides searches by gene or protein name, genus, species, strain, biocard text and metabolic pathway, as well as BLAST search. Gene and protein sequences can be downloaded, and charts describe proteomic and genomic characteristics.
Bacteriome.org is a database integrating physical protein-protein and functional interactions within an E. coli knowledgebase. It offers a functional interaction network derived from genomic datasets using a Bayesian framework, a core network of high-quality experimentally derived protein-protein interactions, and an extended network including less strongly supported interactions. Users can search by gene name, protein domain or functional category.
BACTIBASE is a database dedicated to bacteriocins, which are bacterial antimicrobial peptides. It provides browsing and advanced search across general data, physicochemical profiles, structural information, correlations, taxonomy, literature, anti-infective properties, and antimicrobial combinations. The platform includes tools such as similarity search, BLAST, FASTA, USEARCH, sequence alignment (CLUSTALW, MUSCLE), physicochemical profiling, hidden Markov models, and structure prediction. Users can log in, register, submit sequences, view results, and contribute as 'Molecule Authority'.
BOLD, the Barcode of Life Data Systems, is a data portal for identifying species through DNA barcodes. It provides access to over 21.1m public records representing 1.7m species, with the remaining records awaiting validation and release. BOLDv5 has a redesigned layout, while BOLDv4 remains accessible at v4.boldsystems.org.
The Bash Guide is an open-source guide introducing basic and advanced concepts of the bash shell. It aims to teach newcomers, advanced users and long-time users to write safe and robust bash scripts and interact efficiently with the shell as a command line interface. The guide is a continuing work in progress, with new chapters written and existing chapters updated.
The Benchmark Energy & Geometry Database collects results of highly accurate quantum mechanical calculations of molecular structures, energies and properties. These data serve as benchmarks for testing and parameterizing other computational methods. Featured datasets include interaction energies and dissociation curves for noncovalent complexes.
BGJar is a free SVG background image generator for websites, blogs and apps, offering numerous customizable templates such as Simple Shiny, Wave and Polygon. A license page lists a Free plan requiring attribution under CC BY 4.0, plus Basic and Pro lifetime plans. Direct resale of downloaded items and building similar services are prohibited.
BibGuru is a free citation generator that creates bibliographies and citations in APA, MLA, Harvard, Chicago, and over 8,000 other styles. It allows users to add sources, generate citations quickly, and offers a browser extension for Chrome and Edge. The service provides a paid plan, BibGuru Plus, at $4.99 per month with a three‑day free trial, which includes source saving across devices, project organization, and an ad‑free experience. No sign‑in is required for basic use.
BiGG Models is a knowledgebase of genome-scale metabolic network reconstructions that integrates more than 70 published networks into a single database with standardized BiGG IDs. It can be browsed on the website or accessed using a web API. It is hosted and maintained by the Systems Biology Research Group at the University of California, San Diego.
